root ALL=(ALL) ALL

<username> ALL=(ALL) ALL

Port 21976
Protocol 2
PermitRootLogin no
X11Forwarding no

UseDNS no
AllowUsers <username>

SCGIMount /RPC2 127.0.0.1:5000
servername localhost

http://<servername or IP>

It works!
This is the default web page for this server.
The web server software is running but no content has been added, yet.

<VirtualHost *:80>
ServerAdmin webmaster@localhost

DocumentRoot /var/www/
<Directory />
Options FollowSymLinks
AllowOverride None
</Directory>
<Directory /var/www/>
Options Indexes FollowSymLinks MultiViews
AllowOverride None
Order allow,deny
allow from all
</Directory>

ScriptAlias /cgi-bin/ /usr/lib/cgi-bin/
<Directory "/usr/lib/cgi-bin">
AllowOverride None
Options +ExecCGI -MultiViews +SymLinksIfOwnerMatch
Order allow,deny
Allow from all
</Directory>

ErrorLog /var/log/apache2/error.log

# Possible values include: debug, info, notice, warn, error, crit,
# alert, emerg.
LogLevel warn

CustomLog /var/log/apache2/access.log combined

Alias /doc/ "/usr/share/doc/"
<Directory "/usr/share/doc/">
Options Indexes MultiViews FollowSymLinks
AllowOverride None
Order deny,allow
Deny from all
Allow from 127.0.0.0/255.0.0.0 ::1/128
</Directory>

<Location /rutorrent>
AuthType Digest
AuthName "gods"
AuthDigestDomain /var/www/rutorrent/ http://<servername or IP>/rutorrent

AuthDigestProvider file
AuthUserFile /etc/apache2/passwords
Require valid-user
SetEnv R_ENV "/var/www/rutorrent"
</Location>

</VirtualHost>

<VirtualHost *:443>
ServerAdmin webmaster@localhost

SSLEngine on
SSLCertificateFile /etc/apache2/apache.pem

DocumentRoot /var/www/
<Directory />
Options FollowSymLinks
AllowOverride None
</Directory>
<Directory /var/www/>
Options Indexes FollowSymLinks MultiViews
AllowOverride None
Order allow,deny
allow from all
</Directory>

ScriptAlias /cgi-bin/ /usr/lib/cgi-bin/
<Directory "/usr/lib/cgi-bin">
AllowOverride None
Options +ExecCGI -MultiViews +SymLinksIfOwnerMatch
Order allow,deny
Allow from all
</Directory>

ErrorLog /var/log/apache2/error.log

# Possible values include: debug, info, notice, warn, error, crit,
# alert, emerg.
LogLevel warn

CustomLog /var/log/apache2/access.log combined

Alias /doc/ "/usr/share/doc/"
<Directory "/usr/share/doc/">
Options Indexes MultiViews FollowSymLinks
AllowOverride None
Order deny,allow
Deny from all
Allow from 127.0.0.0/255.0.0.0 ::1/128
</Directory>
<Location /rutorrent>
AuthType Digest
AuthName "gods"
AuthDigestDomain /var/www/rutorrent/ http://<servername or IP>/rutorrent

AuthDigestProvider file
AuthUserFile /etc/apache2/passwords
Require valid-user
SetEnv R_ENV "/var/www/rutorrent"
</Location>
</VirtualHost>

https://<servername or IP>

It works!
This is the default web page for this server.
The web server software is running but no content has been added, yet.

deb http://download.webmin.com/download/repository sarge contrib

https://<servername or IP>:10000

# This is an example resource file for rTorrent. Copy to
# ~/.rtorrent.rc and enable/modify the options as needed. Remember to
# uncomment the options you wish to enable.
#
# Based on original .rtorrent.rc file from http://libtorrent.rakshasa.no/
# Modified by Lemonberry for rtGui http://rtgui.googlecode.com/
#
# This assumes the following directory structure:
#
# /Torrents/Downloading - temporaray location for torrents while downloading (see "directory")
# /Torrents/Complete - Torrents are moved here when complete (see "on_finished")
# /Torrents/TorrentFiles/Auto - The 'autoload' directory for rtorrent to use. Place a file
# in here, and rtorrent loads it #automatically. (see "schedule = watch_directory")
# /Torrents/Downloading/rtorrent.session - for storing rtorrent session information
#

# Maximum and minimum number of peers to connect to per torrent.
#min_peers = 40
max_peers = 100

# Same as above but for seeding completed torrents (-1 = same as downloading)
min_peers_seed = -1
max_peers_seed = -1

# Maximum number of simultanious uploads per torrent.
max_uploads = 50

# Global upload and download rate in KiB. "0" for unlimited.
download_rate = 0
upload_rate = 0

# Default directory to save the downloaded torrents.
directory = /home/downloads/<username>

# Default session directory. Make sure you don't run multiple instance
# of rtorrent using the same session directory. Perhaps using a
# relative path?
session = /home/downloads/<username>/.session

# Watch a directory for new torrents, and stop those that have been
# deleted.
schedule = watch_directory,5,5,load_start=/home/downloads/<username>/watch/*.torrent
schedule = untied_directory,5,5,stop_untied=

# Close torrents when diskspace is low. */
schedule = low_diskspace,5,60,close_low_diskspace=100M

# Stop torrents when reaching upload ratio in percent,
# when also reaching total upload in bytes, or when
# reaching final upload ratio in percent.
# example: stop at ratio 2.0 with at least 200 MB uploaded, or else ratio 20.0
#schedule = ratio,60,60,stop_on_ratio=200,200M,2000


# When the torrent finishes, it executes "mv -n <base_path> ~/Download/"
# and then sets the destination directory to "~/Download/". (0.7.7+)
# on_finished = move_complete,"execute=mv,-u,$d.get_base_path=,/home/downloads/<username>/complete/ ;d.set_directory=/home/downloads/<username>/complete/"

# The ip address reported to the tracker.
#ip = 127.0.0.1
#ip = rakshasa.no

# The ip address the listening socket and outgoing connections is
# bound to.
#bind = 127.0.0.1
#bind = rakshasa.no

# Port range to use for listening.
port_range = 55995-56000

# Start opening ports at a random position within the port range.
#port_random = yes

scgi_port = 127.0.0.1:5000

# Check hash for finished torrents. Might be usefull until the bug is
# fixed that causes lack of diskspace not to be properly reported.
#check_hash = no

# Set whetever the client should try to connect to UDP trackers.
#use_udp_trackers = no

# Alternative calls to bind and ip that should handle dynamic ip's.
#schedule = ip_tick,0,1800,ip=rakshasa
#schedule = bind_tick,0,1800,bind=rakshasa

# Encryption options, set to none (default) or any combination of the following:
# allow_incoming, try_outgoing, require, require_RC4, enable_retry, prefer_plaintext
#
# The example value allows incoming encrypted connections, starts unencrypted
# outgoing connections but retries with encryption if they fail, preferring
# plaintext to RC4 encryption after the encrypted handshake
#
encryption = allow_incoming,enable_retry,prefer_plaintext

# Enable DHT support for trackerless torrents or when all trackers are down.
# May be set to "disable" (completely disable DHT), "off" (do not start DHT),
# "auto" (start and stop DHT as needed), or "on" (start DHT immediately).
# The default is "off". For DHT to work, a session directory must be defined.
#
dht = disable

# UDP port to use for DHT.
#
# dht_port = 6881

# Enable peer exchange (for torrents not marked private)
#
peer_exchange = no

#
# Do not modify the following parameters unless you know what you're doing.
#

# Hash read-ahead controls how many MB to request the kernel to read
# ahead. If the value is too low the disk may not be fully utilized,
# while if too high the kernel might not be able to keep the read
# pages in memory thus end up trashing.
#hash_read_ahead = 10

# Interval between attempts to check the hash, in milliseconds.
#hash_interval = 100

# Number of attempts to check the hash while using the mincore status,
# before forcing. Overworked systems might need lower values to get a
# decent hash checking rate.
#hash_max_tries = 10

# Max number of files to keep open simultaniously.
#max_open_files = 128

# Number of sockets to simultaneously keep open.
#max_open_sockets = <no default>


# Example of scheduling commands: Switch between two ip's every 5
# seconds.
#schedule = "ip_tick1,5,10,ip=torretta"
#schedule = "ip_tick2,10,10,ip=lampedusa"

# Remove a scheduled event.
#schedule_remove = "ip_tick1"

#!/bin/sh
#############
###<Notes>###
#############
# This script depends on screen.
# For the stop function to work, you must set an
# explicit session directory using ABSOLUTE paths (no, ~ is not absolute) in your rtorrent.rc.
# If you typically just start rtorrent with just "rtorrent" on the
# command line, all you need to change is the "user" option.
# Attach to the screen session as your user with
# "screen -dr rtorrent". Change "rtorrent" with srnname option.
# Licensed under the GPLv2 by lostnihilist: lostnihilist _at_ gmail _dot_ com
##############
###</Notes>###
##############

#######################
##Start Configuration##
#######################
# You can specify your configuration in a different file
# (so that it is saved with upgrades, saved in your home directory,
# or whateve reason you want to)
# by commenting out/deleting the configuration lines and placing them
# in a text file (say /home/user/.rtorrent.init.conf) exactly as you would
# have written them here (you can leave the comments if you desire
# and then uncommenting the following line correcting the path/filename
# for the one you used. note the space after the ".".
# . /etc/rtorrent.init.conf

#Do not put a space on either side of the equal signs e.g.
# user = user
# will not work
# system user to run as
user="<username>"

# the system group to run as, not implemented, see d_start for beginning implementation
# group=`id -ng "$user"`

# the full path to the filename where you store your rtorrent configuration
config="`su -c 'echo $HOME' $user`/.rtorrent.rc"

# set of options to run with
options=""

# default directory for screen, needs to be an absolute path
base="`su -c 'echo $HOME' $user`"

# name of screen session
srnname="rtorrent"

# file to log to (makes for easier debugging if something goes wrong)
logfile="/var/log/rtorrentInit.log"
#######################
###END CONFIGURATION###
#######################
PATH=/usr/bin:/usr/local/bin:/usr/local/sbin:/sbin:/bin:/usr/sbin
DESC="rtorrent"
NAME=rtorrent
DAEMON=$NAME
SCRIPTNAME=/etc/init.d/$NAME

checkcnfg() {
exists=0
for i in `echo "$PATH" | tr ':' '\n'` ; do
if [ -f $i/$NAME ] ; then
exists=1
break
fi
done
if [ $exists -eq 0 ] ; then
echo "cannot find rtorrent binary in PATH $PATH" | tee -a "$logfile" >&2
exit 3
fi
if ! [ -r "${config}" ] ; then
echo "cannot find readable config ${config}. check that it is there and permissions are appropriate" | tee -a "$logfile" >&2
exit 3
fi
session=`getsession "$config"`
if ! [ -d "${session}" ] ; then
echo "cannot find readable session directory ${session} from config ${config}. check permissions" | tee -a "$logfile" >&2
exit 3
fi
}

d_start() {
[ -d "${base}" ] && cd "${base}"
stty stop undef && stty start undef
su -c "screen -ls | grep -sq "\.${srnname}[[:space:]]" " ${user} || su -c "screen -dm -S ${srnname} 2>&1 1>/dev/null" ${user} | tee -a "$logfile" >&2
# this works for the screen command, but starting rtorrent below adopts screen session gid
# even if it is not the screen session we started (e.g. running under an undesirable gid
#su -c "screen -ls | grep -sq "\.${srnname}[[:space:]]" " ${user} || su -c "sg \"$group\" -c \"screen -fn -dm -S ${srnname} 2>&1 1>/dev/null\"" ${user} | tee -a "$logfile" >&2
su -c "screen -S "${srnname}" -X screen rtorrent ${options} 2>&1 1>/dev/null" ${user} | tee -a "$logfile" >&2
}

d_stop() {
session=`getsession "$config"`
if ! [ -s ${session}/rtorrent.lock ] ; then
return
fi
pid=`cat ${session}/rtorrent.lock | awk -F: '{print($2)}' | sed "s/[^0-9]//g"`
if ps -A | grep -sq ${pid}.*rtorrent ; then # make sure the pid doesn't belong to another process
kill -s INT ${pid}
fi
}

getsession() {
session=`cat "$1" | grep "^[[:space:]]*session[[:space:]]*=" | sed "s/^[[:space:]]*session[[:space:]]*=[[:space:]]*//" `
echo $session
}

checkcnfg

case "$1" in
start)
echo -n "Starting $DESC: $NAME"
d_start
echo "."
;;
stop)
echo -n "Stopping $DESC: $NAME"
d_stop
echo "."
;;
restart|force-reload)
echo -n "Restarting $DESC: $NAME"
d_stop
sleep 1
d_start
echo "."
;;
*)
echo "Usage: $SCRIPTNAME {start|stop|restart|force-reload}" >&2
exit 1
;;
esac

exit 0

https://<servername or IP>/rutorrent

SCGIMount /RPC2 127.0.0.1:5000

SCGIMount /RPC3 127.0.0.1:5001

# Port range to use for listening.
port_range = 55995-56000

# Start opening ports at a random position within the port range.
#port_random = yes

scgi_port = 127.0.0.1:5000

# Port range to use for listening.
port_range = 56001-56005

# Start opening ports at a random position within the port range.
#port_random = yes

scgi_port = 127.0.0.1:5001

# Default directory to save the downloaded torrents.
directory = /home/downloads/<username>

# Default session directory. Make sure you don't run multiple instance
# of rtorrent using the same session directory. Perhaps using a
# relative path?
session = /home/downloads/<username>/.session

# Watch a directory for new torrents, and stop those that have been
# deleted.
schedule = watch_directory,5,5,load_start=/home/downloads/<username>/watch/*.torrent

# Default directory to save the downloaded torrents.
directory = /home/downloads/<second_username>

# Default session directory. Make sure you don't run multiple instance
# of rtorrent using the same session directory. Perhaps using a
# relative path?
session = /home/downloads/<second_username>/.session

# Watch a directory for new torrents, and stop those that have been
# deleted.
schedule = watch_directory,5,5,load_start=/home/downloads/<second_username>/watch/*.torrent

# system user to run as
user="<username>"

# system user to run as
user="<second_username>"

$scgi_port = 5000;
$scgi_host = "127.0.0.1";
$XMLRPCMountPoint = "/RPC2";

$scgi_port = 5001;
$scgi_host = "127.0.0.1";
$XMLRPCMountPoint = "/RPC3";

https://<servername or IP>/rutorrent/

sudo su

exit

/home/downloads/<username> /home/<username>/downloads none bind 0 0
/home/downloads/<second_username> /home/<second_username>/downloads none bind 0 0

https://<servername or IP>:10000

To me this would be a simpler way checkout rutorrent and get all plugins unless you are only wanting a few plugin which I don't understand why you would want that.